Research Summary
Transcriptional Networks in mouse and human.
Publications
- Amit, Ido;Ardlie, Kristin et al. (2024) The commitment of the human cell atlas to humanityNature Communications
- Kirby, Emily;Bernier, Alexander et al. (2024) Data sharing ethics toolkit: The Human Cell AtlasNature Communications
- Polonsky, Michal;Gerhardt, Louisa M. S. et al. (2024) Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and diseaseNature Communications
- Pardo-Palacios, Francisco J.;Wang, Dingjie et al. (2024) Systematic assessment of long-read RNA-seq methods for transcript identification and quantificationNature Methods
- Zhang, Bao;He, Peng et al. (2023) A human embryonic limb cell atlas resolved in space and timeNature
- Moyers, Belle A.;Partridge, E. Christopher et al. (2023) Characterization of human transcription factor function and patterns of gene regulation in HepG2 cellsGenome Research
- Hitz, Benjamin C.;Lee, Jin-Wook et al. (2023) The ENCODE Uniform Analysis Pipelines
- Upchurch, Sean;Palumbo, Emilio et al. (2023) RNAget: an API to securely retrieve RNA quantificationsBioinformatics
- Zhang, Bao;He, Peng et al. (2022) A human embryonic limb cell atlas resolved in space and time
- Rebboah, Elisabeth;Reese, Fairlie et al. (2021) Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seqGenome Biology